Authors
Svetlana Gerdes1,2, Basma El Yacoubi2, Marc Bailly2*, Ian K. Blaby2*, Crysten E. Blaby-Haas2*, Linda Jeanguenin3*, Aurora Lara-Núñez3*, Anne Pribat3*, Jeffrey C. Waller3*, Andreas Wilke4, Ross Overbeek1, Andrew D. Hanson3#, and Valérie de Crécy-Lagard2#
1Fellowship for Interpretation of Genomes, Burr Ridge, IL, USA |
2Department of Microbiology and Cell Science, University of Florida, Gainesville, FL, USA |
3Department of Horticultural Sciences, University of Florida, Gainesville, FL, USA |
4Computation Institute, University of Chicago, Chicago, IL, USA |
*Contributed equally; #Corresponding authors |
Additional Tables
Description | HTML | Excel |
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Gene families shared between plants and Prokaryotes. This table describes selected prokaryotic members of such gene families, using various parameters precomputed in the SEED database (explained is a separate worksheet within each file). Taken together, these data help select promising research targets - hypothetical gene families, for which functions could be potentially predicted based on non-homology-based clues (e.g. genomic, functional, phylogenetic context, association with specific environmental niche, etc). Also, they facilitate development of specific functional predictions for such families. | Supplemental Table 1A. | download |
Supplemental Table 1B. | download | |
Supplemental Table 1C. | download | |
Hypothetical gene families shared between plants and Prokaryotes, that were linked to general areas of metabolism and physiology, or associated with more specific potential functions. | Supplemental Table 2. | download |